Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL70192.1 | AIL70194.1 | VV93_v1c11010 | VV93_v1c11030 | Permease. | Sodium-type flagellar protein MotY precursor. | 0.513 |
AIL70192.1 | AIL70352.1 | VV93_v1c11010 | VV93_v1c12620 | Permease. | Na+/H+ antiporter. | 0.506 |
AIL70192.1 | AIL72485.1 | VV93_v1c11010 | VV93_v1c34230 | Permease. | Arginine uptake transporter. | 0.733 |
AIL70192.1 | AIL72644.1 | VV93_v1c11010 | VV93_v1c35840 | Permease. | Anti-anti-sigma regulatory factor. | 0.464 |
AIL70192.1 | rnt | VV93_v1c11010 | VV93_v1c11020 | Permease. | Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | 0.755 |
AIL70194.1 | AIL70192.1 | VV93_v1c11030 | VV93_v1c11010 | Sodium-type flagellar protein MotY precursor. | Permease. | 0.513 |
AIL70194.1 | rnt | VV93_v1c11030 | VV93_v1c11020 | Sodium-type flagellar protein MotY precursor. | Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | 0.556 |
AIL70352.1 | AIL70192.1 | VV93_v1c12620 | VV93_v1c11010 | Na+/H+ antiporter. | Permease. | 0.506 |
AIL70352.1 | AIL72485.1 | VV93_v1c12620 | VV93_v1c34230 | Na+/H+ antiporter. | Arginine uptake transporter. | 0.662 |
AIL72485.1 | AIL70192.1 | VV93_v1c34230 | VV93_v1c11010 | Arginine uptake transporter. | Permease. | 0.733 |
AIL72485.1 | AIL70352.1 | VV93_v1c34230 | VV93_v1c12620 | Arginine uptake transporter. | Na+/H+ antiporter. | 0.662 |
AIL72644.1 | AIL70192.1 | VV93_v1c35840 | VV93_v1c11010 | Anti-anti-sigma regulatory factor. | Permease. | 0.464 |
rnt | AIL70192.1 | VV93_v1c11020 | VV93_v1c11010 | Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | Permease. | 0.755 |
rnt | AIL70194.1 | VV93_v1c11020 | VV93_v1c11030 | Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | Sodium-type flagellar protein MotY precursor. | 0.556 |