Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL70090.1 | AIL72312.1 | VV93_v1c09960 | VV93_v1c32460 | Histidine ammonia-lyase. | Glutamate decarboxylase. | 0.901 |
AIL70090.1 | hisB | VV93_v1c09960 | VV93_v1c12660 | Histidine ammonia-lyase. | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | 0.477 |
AIL70090.1 | hisD | VV93_v1c09960 | VV93_v1c12640 | Histidine ammonia-lyase. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.919 |
AIL70090.1 | hutH | VV93_v1c09960 | VV93_v1c17120 | Histidine ammonia-lyase. | Histidine ammonia-lyase; Belongs to the PAL/histidase family. | 0.921 |
AIL72312.1 | AIL70090.1 | VV93_v1c32460 | VV93_v1c09960 | Glutamate decarboxylase. | Histidine ammonia-lyase. | 0.901 |
AIL72312.1 | hisD | VV93_v1c32460 | VV93_v1c12640 | Glutamate decarboxylase. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.901 |
AIL72312.1 | hutH | VV93_v1c32460 | VV93_v1c17120 | Glutamate decarboxylase. | Histidine ammonia-lyase; Belongs to the PAL/histidase family. | 0.901 |
hisA | hisB | VV93_v1c12680 | VV93_v1c12660 | 1-(5-phosphoribosyl)-5- imidazole-4-carboxamide isomerase. | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | 0.999 |
hisA | hisC | VV93_v1c12680 | VV93_v1c12650 | 1-(5-phosphoribosyl)-5- imidazole-4-carboxamide isomerase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.993 |
hisA | hisD | VV93_v1c12680 | VV93_v1c12640 | 1-(5-phosphoribosyl)-5- imidazole-4-carboxamide isomerase. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.993 |
hisA | hisF1 | VV93_v1c12680 | VV93_v1c12690 | 1-(5-phosphoribosyl)-5- imidazole-4-carboxamide isomerase. | Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (By similarity). | 0.999 |
hisA | hisG | VV93_v1c12680 | VV93_v1c12630 | 1-(5-phosphoribosyl)-5- imidazole-4-carboxamide isomerase. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. | 0.993 |
hisA | hisH | VV93_v1c12680 | VV93_v1c12670 | 1-(5-phosphoribosyl)-5- imidazole-4-carboxamide isomerase. | Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR (By similarity). | 0.999 |
hisA | hisI | VV93_v1c12680 | VV93_v1c12700 | 1-(5-phosphoribosyl)-5- imidazole-4-carboxamide isomerase. | Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; In the C-terminal section; belongs to the PRA-PH family. | 0.999 |
hisB | AIL70090.1 | VV93_v1c12660 | VV93_v1c09960 | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | Histidine ammonia-lyase. | 0.477 |
hisB | hisA | VV93_v1c12660 | VV93_v1c12680 | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | 1-(5-phosphoribosyl)-5- imidazole-4-carboxamide isomerase. | 0.999 |
hisB | hisC | VV93_v1c12660 | VV93_v1c12650 | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.999 |
hisB | hisD | VV93_v1c12660 | VV93_v1c12640 | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.999 |
hisB | hisF1 | VV93_v1c12660 | VV93_v1c12690 | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (By similarity). | 0.999 |
hisB | hisG | VV93_v1c12660 | VV93_v1c12630 | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. | 0.998 |
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