Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL70677.1 | AIL70678.1 | VV93_v1c15890 | VV93_v1c15900 | Membrane protein. | Formate dehydrogenase, cytochrome B556 subunit. | 0.800 |
AIL70677.1 | AIL70679.1 | VV93_v1c15890 | VV93_v1c15910 | Membrane protein. | Formate dehydrogenase, iron-sulfur subunit. | 0.777 |
AIL70677.1 | AIL70680.1 | VV93_v1c15890 | VV93_v1c15920 | Membrane protein. | Formate dehydrogenase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.767 |
AIL70677.1 | AIL70681.1 | VV93_v1c15890 | VV93_v1c15930 | Membrane protein. | Transcriptional initiation protein Tat. | 0.753 |
AIL70677.1 | AIL70682.1 | VV93_v1c15890 | VV93_v1c15940 | Membrane protein. | Formate dehydrogenase-specific chaperone. | 0.601 |
AIL70677.1 | AIL70683.1 | VV93_v1c15890 | VV93_v1c15950 | Membrane protein. | Ferredoxin. | 0.635 |
AIL70677.1 | AIL70684.1 | VV93_v1c15890 | VV93_v1c15960 | Membrane protein. | Hypothetical protein. | 0.407 |
AIL70677.1 | AIL70685.1 | VV93_v1c15890 | VV93_v1c15970 | Membrane protein. | Hypothetical protein. | 0.407 |
AIL70678.1 | AIL70677.1 | VV93_v1c15900 | VV93_v1c15890 | Formate dehydrogenase, cytochrome B556 subunit. | Membrane protein. | 0.800 |
AIL70678.1 | AIL70679.1 | VV93_v1c15900 | VV93_v1c15910 | Formate dehydrogenase, cytochrome B556 subunit. | Formate dehydrogenase, iron-sulfur subunit. | 0.999 |
AIL70678.1 | AIL70680.1 | VV93_v1c15900 | VV93_v1c15920 | Formate dehydrogenase, cytochrome B556 subunit. | Formate dehydrogenase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.998 |
AIL70678.1 | AIL70681.1 | VV93_v1c15900 | VV93_v1c15930 | Formate dehydrogenase, cytochrome B556 subunit. | Transcriptional initiation protein Tat. | 0.802 |
AIL70678.1 | AIL70682.1 | VV93_v1c15900 | VV93_v1c15940 | Formate dehydrogenase, cytochrome B556 subunit. | Formate dehydrogenase-specific chaperone. | 0.930 |
AIL70678.1 | AIL70683.1 | VV93_v1c15900 | VV93_v1c15950 | Formate dehydrogenase, cytochrome B556 subunit. | Ferredoxin. | 0.943 |
AIL70678.1 | AIL70684.1 | VV93_v1c15900 | VV93_v1c15960 | Formate dehydrogenase, cytochrome B556 subunit. | Hypothetical protein. | 0.407 |
AIL70678.1 | AIL70685.1 | VV93_v1c15900 | VV93_v1c15970 | Formate dehydrogenase, cytochrome B556 subunit. | Hypothetical protein. | 0.831 |
AIL70678.1 | fdhD | VV93_v1c15900 | VV93_v1c15980 | Formate dehydrogenase, cytochrome B556 subunit. | Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.876 |
AIL70679.1 | AIL70677.1 | VV93_v1c15910 | VV93_v1c15890 | Formate dehydrogenase, iron-sulfur subunit. | Membrane protein. | 0.777 |
AIL70679.1 | AIL70678.1 | VV93_v1c15910 | VV93_v1c15900 | Formate dehydrogenase, iron-sulfur subunit. | Formate dehydrogenase, cytochrome B556 subunit. | 0.999 |
AIL70679.1 | AIL70680.1 | VV93_v1c15910 | VV93_v1c15920 | Formate dehydrogenase, iron-sulfur subunit. | Formate dehydrogenase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.998 |
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