Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIL71027.1Diguanylate cyclase. (282 aa)    
Predicted Functional Partners:
AIL72705.1
Response regulator VieA.
 
 
 0.831
AIL69164.1
Sensory box/GGDEF family protein.
 
 
 0.822
AIL72376.1
Two-component response regulator.
 
 0.822
AIL70913.1
Signal transduction protein.
 
 0.817
AIL73124.1
Diguanylate phosphodiesterase.
 
 0.817
AIL70981.1
Diguanylate cyclase.
 
 
 0.816
AIL70982.1
Diguanylate cyclase.
 
 
 0.816
AIL73262.1
Diguanylate phosphodiesterase.
 
 
 0.816
AIL69279.1
Diguanylate cyclase.
 
 
 0.813
AIL73131.1
Diguanylate cyclase.
 
   0.813
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324
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