STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL71455.1Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family. (488 aa)    
Predicted Functional Partners:
AIL71456.1
Flp pilus assembly protein CpaB.
 
  
 0.975
AIL71450.1
Flp pilus assembly protein, ATPase CpaE.
 
  
 0.957
AIL71447.1
Flp pilus assembly protein TadC.
 
  
 0.942
AIL71449.1
Flp pilus assembly protein TadA.
  
 0.942
AIL71457.1
ATPase.
 
     0.934
AIL71448.1
Flp pilus assembly protein TadB.
 
  
 0.929
AIL71453.1
Pilus assembly protein.
 
  
 0.909
AIL70858.1
Flp pilus assembly protein CpaB.
 
  
 0.893
AIL72662.1
Flp pilus assembly protein TadC.
 
  
 0.860
AIL72660.1
TadA protein.
  
 0.854
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.