Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL69875.1 | AIL72188.1 | VV93_v1c07790 | VV93_v1c31200 | Type IV pilin. | Thermostable hemolysin. | 0.503 |
AIL69875.1 | fadL | VV93_v1c07790 | VV93_v1c21470 | Type IV pilin. | Long-chain fatty acid transport protein. | 0.482 |
AIL69875.1 | fadL-2 | VV93_v1c07790 | VV93_v1c21480 | Type IV pilin. | Long-chain fatty acid transport protein. | 0.482 |
AIL69875.1 | oxyR | VV93_v1c07790 | VV93_v1c27250 | Type IV pilin. | DNA-binding transcriptional regulator OxyR; Belongs to the LysR transcriptional regulatory family. | 0.491 |
AIL69875.1 | tdh | VV93_v1c07790 | VV93_v1c32920 | Type IV pilin. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.504 |
AIL69875.1 | tnaA | VV93_v1c07790 | VV93_v1c42380 | Type IV pilin. | Tryptophanase; Belongs to the beta-eliminating lyase family. | 0.485 |
AIL69875.1 | vmrA | VV93_v1c07790 | VV93_v1c24140 | Type IV pilin. | Multidrug efflux pump VmrA. | 0.581 |
AIL70703.1 | vmrA | VV93_v1c16150 | VV93_v1c24140 | Cell wall-associated hydrolase. | Multidrug efflux pump VmrA. | 0.496 |
AIL71493.1 | vmrA | VV93_v1c24150 | VV93_v1c24140 | Transcriptional regulator. | Multidrug efflux pump VmrA. | 0.723 |
AIL72188.1 | AIL69875.1 | VV93_v1c31200 | VV93_v1c07790 | Thermostable hemolysin. | Type IV pilin. | 0.503 |
AIL72188.1 | fadL | VV93_v1c31200 | VV93_v1c21470 | Thermostable hemolysin. | Long-chain fatty acid transport protein. | 0.412 |
AIL72188.1 | fadL-2 | VV93_v1c31200 | VV93_v1c21480 | Thermostable hemolysin. | Long-chain fatty acid transport protein. | 0.400 |
AIL72188.1 | tdh | VV93_v1c31200 | VV93_v1c32920 | Thermostable hemolysin. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.638 |
AIL72188.1 | vmrA | VV93_v1c31200 | VV93_v1c24140 | Thermostable hemolysin. | Multidrug efflux pump VmrA. | 0.503 |
fadL | AIL69875.1 | VV93_v1c21470 | VV93_v1c07790 | Long-chain fatty acid transport protein. | Type IV pilin. | 0.482 |
fadL | AIL72188.1 | VV93_v1c21470 | VV93_v1c31200 | Long-chain fatty acid transport protein. | Thermostable hemolysin. | 0.412 |
fadL | fadL-2 | VV93_v1c21470 | VV93_v1c21480 | Long-chain fatty acid transport protein. | Long-chain fatty acid transport protein. | 0.550 |
fadL | tdh | VV93_v1c21470 | VV93_v1c32920 | Long-chain fatty acid transport protein. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.487 |
fadL | vmrA | VV93_v1c21470 | VV93_v1c24140 | Long-chain fatty acid transport protein. | Multidrug efflux pump VmrA. | 0.503 |
fadL-2 | AIL69875.1 | VV93_v1c21480 | VV93_v1c07790 | Long-chain fatty acid transport protein. | Type IV pilin. | 0.482 |
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