Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIL71202.1 | AIL71814.1 | VV93_v1c21240 | VV93_v1c27420 | Bacteriocin production protein. | Cell division protein. | 0.727 |
| AIL71202.1 | metJ | VV93_v1c21240 | VV93_v1c27370 | Bacteriocin production protein. | Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family. | 0.603 |
| AIL71546.1 | AIL71814.1 | VV93_v1c24680 | VV93_v1c27420 | Membrane carboxypeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division protein. | 0.818 |
| AIL71546.1 | AIL71874.1 | VV93_v1c24680 | VV93_v1c28020 | Membrane carboxypeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | N-acetylmuramoyl-L-alanine amidase. | 0.576 |
| AIL71546.1 | ftsA | VV93_v1c24680 | VV93_v1c05600 | Membrane carboxypeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.449 |
| AIL71546.1 | ftsI | VV93_v1c24680 | VV93_v1c05510 | Membrane carboxypeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.820 |
| AIL71546.1 | ftsQ | VV93_v1c24680 | VV93_v1c05590 | Membrane carboxypeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division septal protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.429 |
| AIL71546.1 | ftsW | VV93_v1c24680 | VV93_v1c05560 | Membrane carboxypeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division membrane protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.657 |
| AIL71546.1 | ftsZ | VV93_v1c24680 | VV93_v1c05610 | Membrane carboxypeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.493 |
| AIL71546.1 | mreB | VV93_v1c24680 | VV93_v1c26570 | Membrane carboxypeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Rod shape-determining protein MreB. | 0.497 |
| AIL71814.1 | AIL71202.1 | VV93_v1c27420 | VV93_v1c21240 | Cell division protein. | Bacteriocin production protein. | 0.727 |
| AIL71814.1 | AIL71546.1 | VV93_v1c27420 | VV93_v1c24680 | Cell division protein. | Membrane carboxypeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.818 |
| AIL71814.1 | AIL71874.1 | VV93_v1c27420 | VV93_v1c28020 | Cell division protein. | N-acetylmuramoyl-L-alanine amidase. | 0.744 |
| AIL71814.1 | ftsA | VV93_v1c27420 | VV93_v1c05600 | Cell division protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.867 |
| AIL71814.1 | ftsI | VV93_v1c27420 | VV93_v1c05510 | Cell division protein. | Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.761 |
| AIL71814.1 | ftsQ | VV93_v1c27420 | VV93_v1c05590 | Cell division protein. | Cell division septal protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.826 |
| AIL71814.1 | ftsW | VV93_v1c27420 | VV93_v1c05560 | Cell division protein. | Cell division membrane protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.751 |
| AIL71814.1 | ftsZ | VV93_v1c27420 | VV93_v1c05610 | Cell division protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.644 |
| AIL71814.1 | metJ | VV93_v1c27420 | VV93_v1c27370 | Cell division protein. | Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family. | 0.606 |
| AIL71814.1 | mreB | VV93_v1c27420 | VV93_v1c26570 | Cell division protein. | Rod shape-determining protein MreB. | 0.623 |
page 1 of 4