Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL71978.1 | AIL71979.1 | VV93_v1c29090 | VV93_v1c29100 | Hypothetical protein. | RarD protein. | 0.773 |
AIL71978.1 | AIL71980.1 | VV93_v1c29090 | VV93_v1c29110 | Hypothetical protein. | Transcriptional regulator. | 0.565 |
AIL71978.1 | AIL71981.1 | VV93_v1c29090 | VV93_v1c29120 | Hypothetical protein. | Threonine efflux protein. | 0.409 |
AIL71979.1 | AIL71978.1 | VV93_v1c29100 | VV93_v1c29090 | RarD protein. | Hypothetical protein. | 0.773 |
AIL71979.1 | AIL71980.1 | VV93_v1c29100 | VV93_v1c29110 | RarD protein. | Transcriptional regulator. | 0.655 |
AIL71979.1 | AIL71981.1 | VV93_v1c29100 | VV93_v1c29120 | RarD protein. | Threonine efflux protein. | 0.486 |
AIL71980.1 | AIL71978.1 | VV93_v1c29110 | VV93_v1c29090 | Transcriptional regulator. | Hypothetical protein. | 0.565 |
AIL71980.1 | AIL71979.1 | VV93_v1c29110 | VV93_v1c29100 | Transcriptional regulator. | RarD protein. | 0.655 |
AIL71980.1 | AIL71981.1 | VV93_v1c29110 | VV93_v1c29120 | Transcriptional regulator. | Threonine efflux protein. | 0.648 |
AIL71980.1 | AIL72243.1 | VV93_v1c29110 | VV93_v1c31750 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.766 |
AIL71980.1 | AIL72326.1 | VV93_v1c29110 | VV93_v1c32620 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.578 |
AIL71980.1 | AIL72516.1 | VV93_v1c29110 | VV93_v1c34540 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.682 |
AIL71980.1 | AIL72712.1 | VV93_v1c29110 | VV93_v1c36560 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.708 |
AIL71980.1 | AIL72771.1 | VV93_v1c29110 | VV93_v1c37150 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.641 |
AIL71980.1 | AIL73493.1 | VV93_v1c29110 | VV93_v1c44420 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.726 |
AIL71980.1 | AIL73560.1 | VV93_v1c29110 | VV93_v1c45090 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.764 |
AIL71981.1 | AIL71978.1 | VV93_v1c29120 | VV93_v1c29090 | Threonine efflux protein. | Hypothetical protein. | 0.409 |
AIL71981.1 | AIL71979.1 | VV93_v1c29120 | VV93_v1c29100 | Threonine efflux protein. | RarD protein. | 0.486 |
AIL71981.1 | AIL71980.1 | VV93_v1c29120 | VV93_v1c29110 | Threonine efflux protein. | Transcriptional regulator. | 0.648 |
AIL72243.1 | AIL71980.1 | VV93_v1c31750 | VV93_v1c29110 | AraC family transcriptional regulator. | Transcriptional regulator. | 0.766 |
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