Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL70683.1 | AIL72291.1 | VV93_v1c15950 | VV93_v1c32250 | Ferredoxin. | Transcriptional regulator. | 0.434 |
AIL70683.1 | AIL73242.1 | VV93_v1c15950 | VV93_v1c41860 | Ferredoxin. | Ferredoxin-like domain-containing protein. | 0.531 |
AIL70683.1 | AIL73243.1 | VV93_v1c15950 | VV93_v1c41870 | Ferredoxin. | Lactate dehydrogenase. | 0.416 |
AIL70683.1 | napF | VV93_v1c15950 | VV93_v1c41170 | Ferredoxin. | Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family. | 0.458 |
AIL72290.1 | AIL72291.1 | VV93_v1c32240 | VV93_v1c32250 | Peptidase. | Transcriptional regulator. | 0.493 |
AIL72291.1 | AIL70683.1 | VV93_v1c32250 | VV93_v1c15950 | Transcriptional regulator. | Ferredoxin. | 0.434 |
AIL72291.1 | AIL72290.1 | VV93_v1c32250 | VV93_v1c32240 | Transcriptional regulator. | Peptidase. | 0.493 |
AIL72291.1 | AIL72292.1 | VV93_v1c32250 | VV93_v1c32260 | Transcriptional regulator. | Drug/metabolite transporter superfamily permease. | 0.656 |
AIL72291.1 | AIL73242.1 | VV93_v1c32250 | VV93_v1c41860 | Transcriptional regulator. | Ferredoxin-like domain-containing protein. | 0.414 |
AIL72291.1 | AIL73243.1 | VV93_v1c32250 | VV93_v1c41870 | Transcriptional regulator. | Lactate dehydrogenase. | 0.414 |
AIL72291.1 | napF | VV93_v1c32250 | VV93_v1c41170 | Transcriptional regulator. | Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family. | 0.460 |
AIL72292.1 | AIL72291.1 | VV93_v1c32260 | VV93_v1c32250 | Drug/metabolite transporter superfamily permease. | Transcriptional regulator. | 0.656 |
AIL73242.1 | AIL70683.1 | VV93_v1c41860 | VV93_v1c15950 | Ferredoxin-like domain-containing protein. | Ferredoxin. | 0.531 |
AIL73242.1 | AIL72291.1 | VV93_v1c41860 | VV93_v1c32250 | Ferredoxin-like domain-containing protein. | Transcriptional regulator. | 0.414 |
AIL73242.1 | AIL73243.1 | VV93_v1c41860 | VV93_v1c41870 | Ferredoxin-like domain-containing protein. | Lactate dehydrogenase. | 0.998 |
AIL73242.1 | napF | VV93_v1c41860 | VV93_v1c41170 | Ferredoxin-like domain-containing protein. | Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family. | 0.437 |
AIL73243.1 | AIL70683.1 | VV93_v1c41870 | VV93_v1c15950 | Lactate dehydrogenase. | Ferredoxin. | 0.416 |
AIL73243.1 | AIL72291.1 | VV93_v1c41870 | VV93_v1c32250 | Lactate dehydrogenase. | Transcriptional regulator. | 0.414 |
AIL73243.1 | AIL73242.1 | VV93_v1c41870 | VV93_v1c41860 | Lactate dehydrogenase. | Ferredoxin-like domain-containing protein. | 0.998 |
napF | AIL70683.1 | VV93_v1c41170 | VV93_v1c15950 | Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family. | Ferredoxin. | 0.458 |
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