STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL72428.1MoxR-like ATPase. (318 aa)    
Predicted Functional Partners:
AIL72427.1
Hypothetical protein.
 
  
 0.962
AIL72425.1
Aerotolerance operon protein BatA.
 
  
 0.951
AIL72424.1
Hypothetical protein.
 
   
 0.944
AIL72423.1
Protein BatD.
 
  
 0.893
AIL72721.1
MoxR protein.
 
  
 0.840
AIL72426.1
Hypothetical protein.
 
  
 0.839
AIL72723.1
Von Willebrand factor, type A.
 
  
 0.791
AIL72724.1
Hypothetical protein.
 
   
 0.741
AIL71167.1
Lysine decarboxylase.
    
 
 0.530
AIL72138.1
Ornithine decarboxylase.
    
 
 0.530
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324
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