STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL72525.1FAD-dependent oxidoreductase. (482 aa)    
Predicted Functional Partners:
AIL72902.1
NADH oxidase.
   
 
 0.749
AIL72750.1
Glycine cleavage system T protein.
  
 
 0.714
AIL70041.1
Coenzyme A disulfide reductase.
   
 
 0.675
AIL72523.1
Transcriptional regulator.
 
   
 0.597
AIL72526.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.507
AIL72522.1
Iron ABC transporter permease.
 
    0.497
AIL72524.1
Multidrug transporter.
       0.482
AIL72521.1
Spermidine/putrescine ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.464
AIL72527.1
Phosphotransferase.
 
     0.458
AIL72518.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.435
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324
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