STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL72526.1Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (292 aa)    
Predicted Functional Partners:
AIL72305.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.760
AIL72809.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.760
AIL73130.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.758
AIL72281.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.750
AIL73519.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.743
AIL73310.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.733
AIL73010.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.724
AIL73436.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.714
AIL70369.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.713
oxyR
DNA-binding transcriptional regulator OxyR; Belongs to the LysR transcriptional regulatory family.
  
     0.708
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324
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