Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL70400.1 | AIL72891.1 | VV93_v1c13100 | VV93_v1c38350 | Cystathionine beta-lyase. | Aromatic amino acid aminotransferase. | 0.909 |
AIL70400.1 | AIL73092.1 | VV93_v1c13100 | VV93_v1c40360 | Cystathionine beta-lyase. | Rhodanese-related sulfurtransferase. | 0.945 |
AIL70400.1 | cysK | VV93_v1c13100 | VV93_v1c09050 | Cystathionine beta-lyase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.979 |
AIL72285.1 | AIL73092.1 | VV93_v1c32190 | VV93_v1c40360 | Taurine catabolism dioxygenase. | Rhodanese-related sulfurtransferase. | 0.900 |
AIL72285.1 | cysH | VV93_v1c32190 | VV93_v1c26950 | Taurine catabolism dioxygenase. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.909 |
AIL72285.1 | cysI | VV93_v1c32190 | VV93_v1c26960 | Taurine catabolism dioxygenase. | Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.902 |
AIL72285.1 | cysJ | VV93_v1c32190 | VV93_v1c26970 | Taurine catabolism dioxygenase. | Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.901 |
AIL72285.1 | glpE | VV93_v1c32190 | VV93_v1c01050 | Taurine catabolism dioxygenase. | Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide. | 0.904 |
AIL72331.1 | AIL72891.1 | VV93_v1c32670 | VV93_v1c38350 | Lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Aromatic amino acid aminotransferase. | 0.926 |
AIL72331.1 | AIL73092.1 | VV93_v1c32670 | VV93_v1c40360 | Lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Rhodanese-related sulfurtransferase. | 0.905 |
AIL72891.1 | AIL70400.1 | VV93_v1c38350 | VV93_v1c13100 | Aromatic amino acid aminotransferase. | Cystathionine beta-lyase. | 0.909 |
AIL72891.1 | AIL72331.1 | VV93_v1c38350 | VV93_v1c32670 | Aromatic amino acid aminotransferase. | Lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.926 |
AIL72891.1 | AIL73092.1 | VV93_v1c38350 | VV93_v1c40360 | Aromatic amino acid aminotransferase. | Rhodanese-related sulfurtransferase. | 0.911 |
AIL72891.1 | cysK | VV93_v1c38350 | VV93_v1c09050 | Aromatic amino acid aminotransferase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.913 |
AIL73092.1 | AIL70400.1 | VV93_v1c40360 | VV93_v1c13100 | Rhodanese-related sulfurtransferase. | Cystathionine beta-lyase. | 0.945 |
AIL73092.1 | AIL72285.1 | VV93_v1c40360 | VV93_v1c32190 | Rhodanese-related sulfurtransferase. | Taurine catabolism dioxygenase. | 0.900 |
AIL73092.1 | AIL72331.1 | VV93_v1c40360 | VV93_v1c32670 | Rhodanese-related sulfurtransferase. | Lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.905 |
AIL73092.1 | AIL72891.1 | VV93_v1c40360 | VV93_v1c38350 | Rhodanese-related sulfurtransferase. | Aromatic amino acid aminotransferase. | 0.911 |
AIL73092.1 | cysH | VV93_v1c40360 | VV93_v1c26950 | Rhodanese-related sulfurtransferase. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.922 |
AIL73092.1 | cysI | VV93_v1c40360 | VV93_v1c26960 | Rhodanese-related sulfurtransferase. | Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.936 |
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