STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL73387.1Branched-chain amino acid ABC transporter substrate-binding protein. (387 aa)    
Predicted Functional Partners:
AIL72947.1
Two-component response regulatory protein.
 
 
 0.882
AIL73389.1
Histone acetyltransferase HPA2.
       0.776
AIL73388.1
Diguanylate cyclase.
       0.773
AIL73297.1
Ferric reductase.
   
    0.763
AIL72902.1
NADH oxidase.
  
  
 0.654
ulaA
PTS system ascorbate-specific transporter subunit IIC.
   
    0.629
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.582
AIL69895.1
Riboflavin synthase subunit alpha.
  
    0.580
AIL70709.1
Riboflavin synthase subunit alpha.
  
    0.580
rpmE2
50S ribosomal protein L31.
  
    0.529
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324
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