STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ulaD3-keto-L-gulonate-6-phosphate decarboxylase. (215 aa)    
Predicted Functional Partners:
AIL73530.1
L-xylulose 5-phosphate 3-epimerase.
 
 
 0.996
AIL73523.1
L-ascorbate 6-phosphate lactonase.
 
  
 0.983
AIL73526.1
PTS system transporter subunit IIA.
 
  
 0.960
araD
L-ribulose-5-phosphate 4-epimerase.
 
  
 0.943
ulaA-2
PTS system ascorbate-specific transporter subunit IIC.
 
  
 0.936
AIL69518.1
Polysialic acid capsule expression protein.
  
  
 0.900
AIL73528.1
Hydrolase.
       0.800
nanE
N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
    0.648
napA
Periplasmic nitrate reductase NapA; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
      
 0.632
ulaA
PTS system ascorbate-specific transporter subunit IIC.
 
   
 0.631
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324
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