STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD44_01408Unannotated protein. (177 aa)    
Predicted Functional Partners:
vanX-2
Unannotated protein; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
       0.788
SMD44_01410
Unannotated protein.
       0.758
SMD44_01411
Unannotated protein.
       0.569
SMD44_02256
Unannotated protein.
  
    0.516
SMD44_01819
Unannotated protein.
  
     0.478
SMD44_02639
Unannotated protein.
 
     0.460
SMD44_02630
Unannotated protein.
 
    0.447
SMD44_05938
Unannotated protein.
  
     0.439
GCA_000716675_06332
Unannotated protein.
  
     0.421
GCA_000716675_06404
Unannotated protein.
  
    0.403
Your Current Organism:
Streptomyces alboflavus
NCBI taxonomy Id: 67267
Other names: ATCC 12626, ATCC 23874, Actinomyces alboflavus, BCRC 13664, CBS 613.68, CCRC 13664, CCRC:13664, CIP 104427, DSM 40045, IFO 13196, IMET 42936, ISP 5045, JCM 4615, KCTC 9674, NBRC 13196, NRRL B-2373, NRRL-ISP 5045, S. alboflavus, Streptomyces albiflavus, VKM Ac-972
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.