STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUM89846.11,2-oxophytodienoate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)    
Predicted Functional Partners:
KUM97905.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.876
KUM93279.1
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.806
KUM87953.1
acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.733
KUM94129.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.730
AQI88_40620
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.668
KUM98504.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.664
KUM97806.1
Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.664
KUM94864.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.664
KUM91203.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.664
KUM98696.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.622
Your Current Organism:
Streptomyces cellostaticus
NCBI taxonomy Id: 67285
Other names: ATCC 23894, CBS 680.68, DSM 40189, IFO 12849, ISP 5189, JCM 4183, JCM 4631, NBRC 12849, NCIMB 9830, NRRL-ISP 5189, S. cellostaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.