STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQI88_42310Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)    
Predicted Functional Partners:
KUM93153.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.654
KUM92126.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
KUM94726.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.625
KUM92058.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.599
KUM92710.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.591
KUM94500.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
KUM93944.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
KUM97649.1
FmdB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.544
KUM94828.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
KUM95528.1
Toxin-antitoxin system, toxin component; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.511
Your Current Organism:
Streptomyces cellostaticus
NCBI taxonomy Id: 67285
Other names: ATCC 23894, CBS 680.68, DSM 40189, IFO 12849, ISP 5189, JCM 4183, JCM 4631, NBRC 12849, NCIMB 9830, NRRL-ISP 5189, S. cellostaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.