Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMG28971.1 | AMG30899.1 | AL542_00525 | AL542_11365 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
| AMG28971.1 | AMG30918.1 | AL542_00525 | AL542_11480 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinoprotein dehydrogenase-associated SoxYZ-like carrier; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| AMG28971.1 | drrA_1 | AL542_00525 | AL542_11355 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.771 |
| AMG28971.1 | exaA_2 | AL542_00525 | AL542_17210 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinonprotein alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.766 |
| AMG28971.1 | moxF | AL542_00525 | AL542_11475 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| AMG28971.1 | ssuB | AL542_00525 | AL542_00515 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.947 |
| AMG28971.1 | ssuC | AL542_00525 | AL542_00520 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
| AMG28971.1 | ybhR | AL542_00525 | AL542_11350 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.776 |
| AMG28971.1 | yncE | AL542_00525 | AL542_11360 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.800 |
| AMG29448.1 | ssuB | AL542_03215 | AL542_00515 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.855 |
| AMG29448.1 | ssuC | AL542_03215 | AL542_00520 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.870 |
| AMG30899.1 | AMG28971.1 | AL542_11365 | AL542_00525 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
| AMG30899.1 | AMG30918.1 | AL542_11365 | AL542_11480 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinoprotein dehydrogenase-associated SoxYZ-like carrier; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.787 |
| AMG30899.1 | drrA_1 | AL542_11365 | AL542_11355 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| AMG30899.1 | exaA_2 | AL542_11365 | AL542_17210 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinonprotein alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.794 |
| AMG30899.1 | moxF | AL542_11365 | AL542_11475 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.795 |
| AMG30899.1 | ssuC | AL542_11365 | AL542_00520 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.792 |
| AMG30899.1 | ybhR | AL542_11365 | AL542_11350 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| AMG30899.1 | yncE | AL542_11365 | AL542_11360 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.948 |
| AMG30918.1 | AMG28971.1 | AL542_11480 | AL542_00525 | Quinoprotein dehydrogenase-associated SoxYZ-like carrier; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
page 1 of 4