Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMG29854.1 | fadL_1 | AL542_05210 | AL542_05215 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aromatic hydrocarbon degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.481 |
| AMG29854.1 | sigV | AL542_05210 | AL542_05205 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.946 |
| AMG29856.1 | fadL_1 | AL542_05220 | AL542_05215 | Aromatic hydrocarbon degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aromatic hydrocarbon degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.460 |
| fadL_1 | AMG29854.1 | AL542_05215 | AL542_05210 | Aromatic hydrocarbon degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.481 |
| fadL_1 | AMG29856.1 | AL542_05215 | AL542_05220 | Aromatic hydrocarbon degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aromatic hydrocarbon degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.460 |
| fadL_1 | sigV | AL542_05215 | AL542_05205 | Aromatic hydrocarbon degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.481 |
| sigV | AMG29854.1 | AL542_05205 | AL542_05210 | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.946 |
| sigV | fadL_1 | AL542_05205 | AL542_05215 | RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Aromatic hydrocarbon degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.481 |