STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csxABeta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (813 aa)    
Predicted Functional Partners:
fruK
1-phosphofructokinase; Converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.
   
    0.805
AMG31782.1
Phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.660
ebgC
beta-D-galactosidase; In Escherichia coli this is the second beta-galactosidase system; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.656
AMG31026.1
N,N'-diacetylchitobiose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.625
AMG31794.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.577
AMG32093.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.551
AMG29638.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.550
AMG30621.1
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.544
AMG29637.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.543
AMG29636.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.542
Your Current Organism:
Grimontia hollisae
NCBI taxonomy Id: 673
Other names: ATCC 33564, CAIM 625, CCUG 13625, CDC 0075-80, CIP 101886, DSM 15132, G. hollisae, IMET 12291, LMG 17719, LMG:17719, NCTC 11640, Special Bacteriology group EF-13, Vibrio hollisae
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.