Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMG30900.1 | AMG30901.1 | AL542_11370 | AL542_11375 | Cytochrome c-550 PedF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.947 |
| AMG30900.1 | AMG30905.1 | AL542_11370 | AL542_11405 | Cytochrome c-550 PedF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Coenzyme PQQ synthesis protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.654 |
| AMG30900.1 | exaA_2 | AL542_11370 | AL542_17210 | Cytochrome c-550 PedF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinonprotein alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.877 |
| AMG30900.1 | moaA-2 | AL542_11370 | AL542_11410 | Cytochrome c-550 PedF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroloquinoline quinone biosynthesis protein PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). | 0.646 |
| AMG30900.1 | moxF | AL542_11370 | AL542_11475 | Cytochrome c-550 PedF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
| AMG30900.1 | pqqB | AL542_11370 | AL542_11395 | Cytochrome c-550 PedF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroloquinoline quinone biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.731 |
| AMG30900.1 | pqqC | AL542_11370 | AL542_11400 | Cytochrome c-550 PedF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroloquinoline quinone biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. | 0.770 |
| AMG30900.1 | yccM_1 | AL542_11370 | AL542_11390 | Cytochrome c-550 PedF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.851 |
| AMG30901.1 | AMG30900.1 | AL542_11375 | AL542_11370 | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c-550 PedF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.947 |
| AMG30901.1 | AMG30905.1 | AL542_11375 | AL542_11405 | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Coenzyme PQQ synthesis protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.554 |
| AMG30901.1 | exaA_2 | AL542_11375 | AL542_17210 | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinonprotein alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.795 |
| AMG30901.1 | moaA-2 | AL542_11375 | AL542_11410 | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroloquinoline quinone biosynthesis protein PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). | 0.490 |
| AMG30901.1 | moxF | AL542_11375 | AL542_11475 | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
| AMG30901.1 | pqqB | AL542_11375 | AL542_11395 | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroloquinoline quinone biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.575 |
| AMG30901.1 | pqqC | AL542_11375 | AL542_11400 | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroloquinoline quinone biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. | 0.582 |
| AMG30901.1 | yccM_1 | AL542_11375 | AL542_11390 | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
| AMG30905.1 | AMG30900.1 | AL542_11405 | AL542_11370 | Coenzyme PQQ synthesis protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c-550 PedF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.654 |
| AMG30905.1 | AMG30901.1 | AL542_11405 | AL542_11375 | Coenzyme PQQ synthesis protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.554 |
| AMG30905.1 | AMG30907.1 | AL542_11405 | AL542_11415 | Coenzyme PQQ synthesis protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase insulinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.657 |
| AMG30905.1 | exaA_2 | AL542_11405 | AL542_17210 | Coenzyme PQQ synthesis protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinonprotein alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
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