Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMG28971.1 | AMG30899.1 | AL542_00525 | AL542_11365 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
| AMG28971.1 | AMG30915.1 | AL542_00525 | AL542_11460 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.762 |
| AMG28971.1 | AMG30918.1 | AL542_00525 | AL542_11480 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinoprotein dehydrogenase-associated SoxYZ-like carrier; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| AMG28971.1 | AMG32169.1 | AL542_00525 | AL542_11465 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.751 |
| AMG28971.1 | AMG32170.1 | AL542_00525 | AL542_11485 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
| AMG28971.1 | AMG32171.1 | AL542_00525 | AL542_11490 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| AMG28971.1 | moxF | AL542_00525 | AL542_11475 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.777 |
| AMG28971.1 | pqqB | AL542_00525 | AL542_11395 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroloquinoline quinone biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.617 |
| AMG28971.1 | pqqC | AL542_00525 | AL542_11400 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroloquinoline quinone biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. | 0.625 |
| AMG28971.1 | yncE | AL542_00525 | AL542_11360 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.800 |
| AMG30899.1 | AMG28971.1 | AL542_11365 | AL542_00525 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
| AMG30899.1 | AMG30915.1 | AL542_11365 | AL542_11460 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.767 |
| AMG30899.1 | AMG30918.1 | AL542_11365 | AL542_11480 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinoprotein dehydrogenase-associated SoxYZ-like carrier; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.787 |
| AMG30899.1 | AMG32169.1 | AL542_11365 | AL542_11465 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.733 |
| AMG30899.1 | AMG32170.1 | AL542_11365 | AL542_11485 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.739 |
| AMG30899.1 | AMG32171.1 | AL542_11365 | AL542_11490 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.805 |
| AMG30899.1 | moxF | AL542_11365 | AL542_11475 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.795 |
| AMG30899.1 | pqqB | AL542_11365 | AL542_11395 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroloquinoline quinone biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.678 |
| AMG30899.1 | pqqC | AL542_11365 | AL542_11400 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroloquinoline quinone biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. | 0.684 |
| AMG30899.1 | yncE | AL542_11365 | AL542_11360 | Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.948 |
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