pspF protein (Grimontia hollisae) - STRING interaction network

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[Homology]

Score

pspF

AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)

Predicted Functional Partners:

AMG30275.1

0.985

pspA

0.973

pspC

0.763

pspB

0.678

rpoA

0.657

rpoZ

0.657

rpoB

0.657

rpoC

0.657

gsiA_4

0.551

gsiA_3

0.551

Your Current Organism:

Grimontia hollisae

NCBI taxonomy Id: 673
Other names: ATCC 33564, CAIM 625, CCUG 13625, CDC 0075-80, CIP 101886, DSM 15132, G. hollisae, IMET 12291, LMG 17719, LMG:17719, NCTC 11640, Special Bacteriology group EF-13, Vibrio hollisae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMG30275.1	pspF	AL542_07665	AL542_14805	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
AMG30275.1	rpoA	AL542_07665	AL542_08030	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.969
AMG30275.1	rpoB	AL542_07665	AL542_10545	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.971
AMG30275.1	rpoC	AL542_07665	AL542_10550	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.971
AMG30275.1	rpoZ	AL542_07665	AL542_09015	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.942
gsiA_3	gsiA_4	AL542_14785	AL542_14780	Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
gsiA_3	pspA	AL542_14785	AL542_14810	Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Phage shock protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
gsiA_3	pspB	AL542_14785	AL542_14815	Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Phage shock protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
gsiA_3	pspC	AL542_14785	AL542_14820	Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Phage shock protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
gsiA_3	pspF	AL542_14785	AL542_14805	Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
gsiA_4	gsiA_3	AL542_14780	AL542_14785	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.969
gsiA_4	pspA	AL542_14780	AL542_14810	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage shock protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
gsiA_4	pspB	AL542_14780	AL542_14815	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage shock protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
gsiA_4	pspC	AL542_14780	AL542_14820	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage shock protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
gsiA_4	pspF	AL542_14780	AL542_14805	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
pspA	gsiA_3	AL542_14810	AL542_14785	Phage shock protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.436
pspA	gsiA_4	AL542_14810	AL542_14780	Phage shock protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
pspA	pspB	AL542_14810	AL542_14815	Phage shock protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage shock protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
pspA	pspC	AL542_14810	AL542_14820	Phage shock protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage shock protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
pspA	pspF	AL542_14810	AL542_14805	Phage shock protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973

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