Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQJ54_20065 | FabD | AQJ54_20065 | AQJ54_09180 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1; Derived by automated computational analysis using gene prediction method: Protein Homology. | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
AQJ54_20065 | KUN67732.1 | AQJ54_20065 | AQJ54_14390 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.472 |
FabD | AQJ54_20065 | AQJ54_09180 | AQJ54_20065 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
FabD | KUN67732.1 | AQJ54_09180 | AQJ54_14390 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.437 |
KUN67731.1 | KUN67732.1 | AQJ54_14385 | AQJ54_14390 | Ribonuclease inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.848 |
KUN67731.1 | whiB-5 | AQJ54_14385 | AQJ54_14410 | Ribonuclease inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.428 |
KUN67732.1 | AQJ54_20065 | AQJ54_14390 | AQJ54_20065 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.472 |
KUN67732.1 | FabD | AQJ54_14390 | AQJ54_09180 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.437 |
KUN67732.1 | KUN67731.1 | AQJ54_14390 | AQJ54_14385 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.848 |
KUN67732.1 | upp | AQJ54_14390 | AQJ54_32020 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.645 |
KUN67732.1 | whiB-5 | AQJ54_14390 | AQJ54_14410 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.428 |
upp | KUN67732.1 | AQJ54_32020 | AQJ54_14390 | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.645 |
whiB-5 | KUN67731.1 | AQJ54_14410 | AQJ54_14385 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Ribonuclease inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
whiB-5 | KUN67732.1 | AQJ54_14410 | AQJ54_14390 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |