LsrB protein (Streptomyces griseorubiginosus)

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Predicted Interactions

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protein homology

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[Homology]

Score

LsrB

Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)

Predicted Functional Partners:

LsrD_1

0.994

RbsC_1

0.993

rbsA-2

0.970

RhaM_1

0.947

LuxQ_1

0.918

LuxQ_2

0.888

ArcB_2

0.880

RhaB

0.839

XylA_1

0.838

KUN65551.1

0.821

Your Current Organism:

Streptomyces griseorubiginosus

NCBI taxonomy Id: 67304
Other names: ATCC 23627, ATCC 23946 [[Streptomyces phaeopurpureus]], ATCC 23947 [[Streptomyces phaeoviridis]], ATCC 25459, Actinomyces griseorubiginosus, BCRC 12124, BCRC 13754 [[Streptomyces phaeopurpureus]], CBS 692.69, CBS 930.68 [[Streptomyces phaeopurpureus]], CCRC 12124, CCRC 13754 [[Streptomyces phaeopurpureus]], CCRC:12124, CCRC:13754 [[Streptomyces phaeopurpureus]], DSM 40125 [[Streptomyces phaeopurpureus]], DSM 40469, HAMBI 950 [[Streptomyces phaeopurpureus]], IFO 12899 [[Streptomyces phaeopurpureus]], IFO 12900 [[Streptomyces phaeoviridis]], IFO 13047, IFO 3930 [[Streptomyces phaeopurpureus]], INA 7712, ISP 5125 [[Streptomyces phaeopurpureus]], ISP 5469, JCM 4101 [[Streptomyces phaeopurpureus]], JCM 4481, JCM 4660 [[Streptomyces phaeopurpureus]], JCM 4661 [[Streptomyces phaeoviridis]], KCTC 9764 [[Streptomyces phaeopurpureus]], LMG 19941, LMG:19941, NBRC 12899 [[Streptomyces phaeopurpureus]], NBRC 12900 [[Streptomyces phaeoviridis]], NBRC 13047, NBRC 3930 [[Streptomyces phaeopurpureus]], NCIMB 9832 [[Streptomyces phaeoviridis]], NRRL B-12384, NRRL B-2258 [[Streptomyces phaeoviridis]], NRRL B-2260 [[Streptomyces phaeopurpureus]], NRRL-ISP 5125 [[Streptomyces phaeopurpureus]], NRRL-ISP 5469, NRRL:B:2258 [[Streptomyces phaeoviridis]], S. griseorubiginosus, Streptomyces griseirubiginosus, Streptomyces phaeopurpureus, Streptomyces phaeoviridis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ArcB_2	LsrB	AQJ54_29275	AQJ54_22345	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
ArcB_2	LuxQ_1	AQJ54_29275	AQJ54_18580	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ArcB_2	LuxQ_2	AQJ54_29275	AQJ54_08105	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KUN65551.1	LsrB	AQJ54_22335	AQJ54_22345	Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
KUN65551.1	LsrD_1	AQJ54_22335	AQJ54_22350	Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.735
KUN65551.1	RbsC_1	AQJ54_22335	AQJ54_22355	Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.735
KUN65551.1	RhaB	AQJ54_22335	AQJ54_22375	Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.603
KUN65551.1	RhaM_1	AQJ54_22335	AQJ54_22340	Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-rhamnose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.891
KUN65551.1	XylA_1	AQJ54_22335	AQJ54_22365	Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rhamnose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.694
KUN65551.1	rbsA-2	AQJ54_22335	AQJ54_22360	Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-ribose transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	0.447
LsrB	ArcB_2	AQJ54_22345	AQJ54_29275	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
LsrB	KUN65551.1	AQJ54_22345	AQJ54_22335	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
LsrB	LsrD_1	AQJ54_22345	AQJ54_22350	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.994
LsrB	LuxQ_1	AQJ54_22345	AQJ54_18580	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
LsrB	LuxQ_2	AQJ54_22345	AQJ54_08105	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
LsrB	RbsC_1	AQJ54_22345	AQJ54_22355	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.993
LsrB	RhaB	AQJ54_22345	AQJ54_22375	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.839
LsrB	RhaM_1	AQJ54_22345	AQJ54_22340	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-rhamnose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
LsrB	XylA_1	AQJ54_22345	AQJ54_22365	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rhamnose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.838
LsrB	rbsA-2	AQJ54_22345	AQJ54_22360	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-ribose transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	0.970

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