LiaS_4 protein (Streptomyces griseorubiginosus)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

LiaS_4

Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)

Predicted Functional Partners:

DegU_8

0.739

VraR_2

0.733

VraR_3

0.724

LiaR_9

0.718

VraR_1

0.712

liaR_11

0.712

KUN58746.1

0.712

DesR_1

0.708

LiaR_1

0.706

AQJ54_39810

0.706

Your Current Organism:

Streptomyces griseorubiginosus

NCBI taxonomy Id: 67304
Other names: ATCC 23627, ATCC 23946 [[Streptomyces phaeopurpureus]], ATCC 23947 [[Streptomyces phaeoviridis]], ATCC 25459, Actinomyces griseorubiginosus, BCRC 12124, BCRC 13754 [[Streptomyces phaeopurpureus]], CBS 692.69, CBS 930.68 [[Streptomyces phaeopurpureus]], CCRC 12124, CCRC 13754 [[Streptomyces phaeopurpureus]], CCRC:12124, CCRC:13754 [[Streptomyces phaeopurpureus]], DSM 40125 [[Streptomyces phaeopurpureus]], DSM 40469, HAMBI 950 [[Streptomyces phaeopurpureus]], IFO 12899 [[Streptomyces phaeopurpureus]], IFO 12900 [[Streptomyces phaeoviridis]], IFO 13047, IFO 3930 [[Streptomyces phaeopurpureus]], INA 7712, ISP 5125 [[Streptomyces phaeopurpureus]], ISP 5469, JCM 4101 [[Streptomyces phaeopurpureus]], JCM 4481, JCM 4660 [[Streptomyces phaeopurpureus]], JCM 4661 [[Streptomyces phaeoviridis]], KCTC 9764 [[Streptomyces phaeopurpureus]], LMG 19941, LMG:19941, NBRC 12899 [[Streptomyces phaeopurpureus]], NBRC 12900 [[Streptomyces phaeoviridis]], NBRC 13047, NBRC 3930 [[Streptomyces phaeopurpureus]], NCIMB 9832 [[Streptomyces phaeoviridis]], NRRL B-12384, NRRL B-2258 [[Streptomyces phaeoviridis]], NRRL B-2260 [[Streptomyces phaeopurpureus]], NRRL-ISP 5125 [[Streptomyces phaeopurpureus]], NRRL-ISP 5469, NRRL:B:2258 [[Streptomyces phaeoviridis]], S. griseorubiginosus, Streptomyces griseirubiginosus, Streptomyces phaeopurpureus, Streptomyces phaeoviridis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQJ54_39810	LiaS_4	AQJ54_39810	AQJ54_37380	Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
DegU_8	LiaS_4	AQJ54_31710	AQJ54_37380	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
DesR_1	LiaS_4	AQJ54_21860	AQJ54_37380	LuxR family two component transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KUN58746.1	LiaS_4	AQJ54_40955	AQJ54_37380	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
LiaR_1	LiaS_4	AQJ54_20260	AQJ54_37380	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
LiaR_9	LiaS_4	AQJ54_10540	AQJ54_37380	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.718
LiaS_4	AQJ54_39810	AQJ54_37380	AQJ54_39810	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
LiaS_4	DegU_8	AQJ54_37380	AQJ54_31710	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
LiaS_4	DesR_1	AQJ54_37380	AQJ54_21860	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family two component transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
LiaS_4	KUN58746.1	AQJ54_37380	AQJ54_40955	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
LiaS_4	LiaR_1	AQJ54_37380	AQJ54_20260	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
LiaS_4	LiaR_9	AQJ54_37380	AQJ54_10540	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.718
LiaS_4	VraR_1	AQJ54_37380	AQJ54_16020	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
LiaS_4	VraR_2	AQJ54_37380	AQJ54_30915	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
LiaS_4	VraR_3	AQJ54_37380	AQJ54_30905	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family two component transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
LiaS_4	liaR_11	AQJ54_37380	AQJ54_27240	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
VraR_1	LiaS_4	AQJ54_16020	AQJ54_37380	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
VraR_2	LiaS_4	AQJ54_30915	AQJ54_37380	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
VraR_2	VraR_3	AQJ54_30915	AQJ54_30905	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family two component transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
VraR_3	LiaS_4	AQJ54_30905	AQJ54_37380	LuxR family two component transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724

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