STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718625_03006Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000718625_02020
Unannotated protein.
    
  0.770
GCA_000718625_06977
Unannotated protein.
  
 
   0.738
GCA_000718625_02489
Unannotated protein.
  
  0.721
GCA_000718625_04142
Unannotated protein.
  
  0.708
GCA_000718625_02336
Unannotated protein.
  
  0.701
GCA_000718625_00205
Unannotated protein.
  
  0.658
GCA_000718625_01687
Unannotated protein.
   
  0.647
GCA_000718625_02494
Unannotated protein.
   
  0.647
GCA_000718625_03894
Unannotated protein.
   
  0.647
GCA_000718625_05185
Unannotated protein.
   
  0.647
Your Current Organism:
Streptomyces lavenduligriseus
NCBI taxonomy Id: 67315
Other names: ATCC 13306, ATCC 29661, CBS 706.72, DSM 40487, IFO 13405, ISP 5487, JCM 4545, JCM 4779, NBRC 13405, NRRL B-3173, NRRL-ISP 5487, S. lavenduligriseus, Streptoverticillium lavenduligriseum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.