STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718625_03875Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000718625_06953
Unannotated protein.
    
  0.827
GCA_000718625_03464
Unannotated protein.
    
  0.668
GCA_000718625_05921
Unannotated protein.
    
  0.608
GCA_000718625_03946
Unannotated protein.
  
 
 0.606
GCA_000718625_01524
Unannotated protein.
     
 0.584
GCA_000718625_07202
Unannotated protein.
     
 0.584
GCA_000718625_02517
Unannotated protein.
    
  0.580
GCA_000718625_03938
Unannotated protein.
  
 
 0.570
GCA_000718625_03522
Unannotated protein.
     
 0.558
GCA_000718625_02369
Unannotated protein.
    
 0.549
Your Current Organism:
Streptomyces lavenduligriseus
NCBI taxonomy Id: 67315
Other names: ATCC 13306, ATCC 29661, CBS 706.72, DSM 40487, IFO 13405, ISP 5487, JCM 4545, JCM 4779, NBRC 13405, NRRL B-3173, NRRL-ISP 5487, S. lavenduligriseus, Streptoverticillium lavenduligriseum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.