STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718625_07128Unannotated protein. (909 aa)    
Predicted Functional Partners:
GCA_000718625_02305
Unannotated protein.
 
  
 0.743
GCA_000718625_07810
Unannotated protein.
  
   
 0.660
GCA_000718625_03179
Unannotated protein.
    
 
 0.634
GCA_000718625_07809
Unannotated protein.
  
   
 0.633
GCA_000718625_05001
Unannotated protein.
  
   
 0.624
GCA_000718625_07123
Unannotated protein.
  
   
 0.579
GCA_000718625_03937
Unannotated protein.
  
   
 0.566
GCA_000718625_01392
Unannotated protein.
  
     0.520
GCA_000718625_07074
Unannotated protein.
  
     0.491
GCA_000718625_07785
Unannotated protein.
  
   
 0.482
Your Current Organism:
Streptomyces lavenduligriseus
NCBI taxonomy Id: 67315
Other names: ATCC 13306, ATCC 29661, CBS 706.72, DSM 40487, IFO 13405, ISP 5487, JCM 4545, JCM 4779, NBRC 13405, NRRL B-3173, NRRL-ISP 5487, S. lavenduligriseus, Streptoverticillium lavenduligriseum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.