STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718625_07345Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_000718625_07344
Unannotated protein.
 
   
 0.956
GCA_000718625_01892
Unannotated protein.
  
 0.901
GCA_000718625_04989
Unannotated protein.
  
 0.901
GCA_000718625_03705
Unannotated protein.
   
   0.803
GCA_000718625_05772
Unannotated protein.
   
   0.803
GCA_000718625_07343
Unannotated protein.
       0.797
GCA_000718625_03437
Unannotated protein.
  
 
 0.748
GCA_000718625_03167
Unannotated protein.
   
    0.744
GCA_000718625_04530
Unannotated protein.
   
    0.744
GCA_000718625_04529
Unannotated protein.
   
    0.727
Your Current Organism:
Streptomyces lavenduligriseus
NCBI taxonomy Id: 67315
Other names: ATCC 13306, ATCC 29661, CBS 706.72, DSM 40487, IFO 13405, ISP 5487, JCM 4545, JCM 4779, NBRC 13405, NRRL B-3173, NRRL-ISP 5487, S. lavenduligriseus, Streptoverticillium lavenduligriseum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.