Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEB30994.1ABC-2 type transport system permease protein. (242 aa)    
Predicted Functional Partners:
SEB30987.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.965
SED53589.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.853
SEC72642.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.849
SED53665.1
Two-component system, NarL family, sensor histidine kinase DesK.
  
    0.658
SED53699.1
Two component transcriptional regulator, LuxR family.
  
     0.607
SEB30978.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
       0.556
SEC58255.1
Cytochrome c oxidase assembly protein subunit 15.
 
  
  0.556
SEB31136.1
Two-component system, NarL family, sensor histidine kinase DesK.
  
    0.550
SEB31142.1
Two component transcriptional regulator, LuxR family.
  
     0.540
SEC63406.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.479
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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