STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB76529.1Hypothetical protein. (1012 aa)    
Predicted Functional Partners:
SEB76567.1
Dehydrogenase (flavoprotein).
 
     0.967
SEC69332.1
Alpha-1,6-glucosidases, pullulanase-type.
   
    0.672
SEC04938.1
Hypothetical protein.
    
  0.562
SED66909.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
  0.552
SED64291.1
Starch phosphorylase.
   
    0.523
SEC84465.1
4-alpha-glucanotransferase.
   
    0.491
SED73932.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
   
    0.491
SEC00354.1
Hypothetical protein.
   
    0.489
SEC07663.1
Maltokinase.
   
    0.489
SED02034.1
Maltokinase.
   
    0.489
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.