Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEB89717.15-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase. (281 aa)    
Predicted Functional Partners:
SEB89753.1
Aromatic ring-opening dioxygenase, catalytic subunit, LigB family.
 
  
 0.965
SEB89831.1
Acetoacetate decarboxylase.
 
     0.902
SEB89792.1
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  0.870
SEB89676.1
DNA-binding transcriptional regulator YbjK.
       0.841
SED58511.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.794
SEB89907.1
Ferredoxin.
 
     0.742
SED50699.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.715
ureAB
Urease subunit gamma/beta; In the C-terminal section; belongs to the urease beta subunit family.
     
  0.690
SEB89944.1
Glutamine synthetase.
 
     0.685
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
  0.682
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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