Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEB89753.1Aromatic ring-opening dioxygenase, catalytic subunit, LigB family. (304 aa)    
Predicted Functional Partners:
SEB89717.1
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
 
  
 0.965
SEB89792.1
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.955
SEB89831.1
Acetoacetate decarboxylase.
 
     0.925
SEB89907.1
Ferredoxin.
 
     0.858
SEB89944.1
Glutamine synthetase.
 
   
 0.835
SEB89676.1
DNA-binding transcriptional regulator YbjK.
       0.834
SEB89986.1
Cytochrome P450.
 
  
  0.808
SEB89594.1
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.775
SEB89517.1
DNA-binding transcriptional regulator, MarR family.
  
  
  0.757
SEB89555.1
Putative glutamine amidotransferase.
 
     0.736
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
Server load: medium (42%) [HD]