Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEB95019.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (210 aa)    
Predicted Functional Partners:
SEB95060.1
Signal transduction histidine kinase.
 
 0.968
SED73752.1
Signal transduction histidine kinase.
   
 0.959
SEC53648.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  0.874
SED64691.1
Signal transduction histidine kinase.
 
 0.870
SED49890.1
Signal transduction histidine kinase.
  
  0.847
SEE00564.1
Signal transduction histidine kinase.
 
 0.846
SED76346.1
Signal transduction histidine kinase.
  
  0.841
SEC67135.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  0.840
SED30058.1
Signal transduction histidine kinase.
  
  0.832
SED11075.1
Signal transduction histidine kinase.
  
  0.824
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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