STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC05659.1Integral membrane sensor domain MASE1. (340 aa)    
Predicted Functional Partners:
SED73752.1
Signal transduction histidine kinase.
 
 0.993
SED72978.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
  
 0.873
SED67001.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.855
SED05193.1
PAS domain S-box-containing protein.
   
 0.831
SEC05699.1
Stage II sporulation protein E (SpoIIE).
 
 0.827
SED52454.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 0.802
SEC26302.1
Hypothetical protein.
  
  
 0.775
SED20534.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.772
SED52481.1
PAS domain S-box-containing protein.
 
 0.772
SED07648.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.751
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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