STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC29772.1DNA-binding transcriptional regulator, AcrR family. (214 aa)    
Predicted Functional Partners:
SEC29726.1
Acyl-CoA dehydrogenase.
       0.789
SEC69302.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.667
SED59085.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.665
SEC66430.1
AsnC family protein.
  
   
 0.576
SED69817.1
RNA-binding protein (KH domain); Belongs to the UPF0109 family.
      
 0.485
SED91068.1
Polyketide cyclase / dehydrase and lipid transport.
      
 0.485
SEE13161.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.475
SED62923.1
DNA-binding transcriptional regulator, MarR family.
  
   
 0.470
SEC74979.1
Protein of unknown function.
  
     0.445
SED34916.1
Transcriptional regulator, AsnC family.
      
 0.440
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.