Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEC40864.1Predicted ATPase. (721 aa)    
Predicted Functional Partners:
SED35395.1
DNA-binding transcriptional activator of the SARP family.
 
  
 0.889
SEC96920.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.800
SEB85894.1
Hypothetical protein.
   
  
 0.797
SED87439.1
DNA-binding transcriptional regulator, HxlR family.
  
    0.797
SED63218.1
DNA-binding transcriptional regulator, MarR family.
  
    0.772
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.768
SEC40786.1
Hypothetical protein.
       0.768
SEC40820.1
Protein of unknown function.
       0.768
SEC08197.1
LysR family transcriptional regulator, chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
   
    0.753
SEC58083.1
Predicted transcriptional regulator, ArsR family.
   
    0.753
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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