STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC42358.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
SEC42403.1
Thioredoxin; Manually curated.
       0.787
SEC42319.1
Hypothetical protein.
       0.768
SED18250.1
Hypothetical protein.
  
     0.764
SEC97960.1
Hypothetical protein.
  
     0.759
SEC18253.1
Hypothetical protein.
  
     0.755
SEC65824.1
Hypothetical protein.
  
     0.736
SEC96352.1
Hypothetical protein.
  
     0.734
SED67823.1
Hypothetical protein.
  
     0.723
SEC71227.1
Hypothetical protein.
  
     0.720
SEC57302.1
Hypothetical protein.
  
     0.692
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.