STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC43834.1Two-component system, OmpR family, response regulator. (246 aa)    
Predicted Functional Partners:
SED73752.1
Signal transduction histidine kinase.
  
0.997
SEC43801.1
Two-component system, OmpR family, sensor kinase.
 
 0.979
SED21272.1
Two-component system, OmpR family, sensor kinase.
 
 0.914
SED33558.1
Two-component system, OmpR family, sensor histidine kinase MprB.
 
 0.899
SEB95856.1
Two-component system, OmpR family, sensor kinase.
 
 0.897
SED77415.1
Signal transduction histidine kinase.
 
 0.896
SED24971.1
Two-component system, OmpR family, sensor histidine kinase MprB.
 
 0.893
SED09422.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.892
SED51560.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
  
  0.878
SED46902.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
  
 0.871
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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