STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC46096.1Glycine betaine/proline transport system substrate-binding protein. (604 aa)    
Predicted Functional Partners:
SEC46137.1
Glycine betaine/proline transport system ATP-binding protein.
 0.999
SED44204.1
Glycine betaine/proline transport system ATP-binding protein.
 0.999
SED44274.1
Glycine betaine/proline transport system substrate-binding protein.
 
 
0.991
SED44246.1
Glycine betaine/proline transport system permease protein.
 
 
0.988
purN
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.891
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
   
    0.833
SEE12723.1
Osmoprotectant transport system permease protein.
 
 
0.831
SED84199.1
Osmoprotectant transport system permease protein.
 
 
0.830
SED84230.1
Osmoprotectant transport system permease protein.
 
 
0.830
SEE12698.1
Osmoprotectant transport system permease protein.
 
 
0.828
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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