STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC49296.1Hypothetical protein. (432 aa)    
Predicted Functional Partners:
SEC49249.1
Uncharacterized conserved protein YbbC, DUF1343 family.
       0.803
SEC49210.1
Short-chain dehydrogenase.
       0.734
SEC49133.1
DNA-binding transcriptional regulator, AcrR family.
       0.722
SEB81878.1
Tetratricopeptide repeat-containing protein.
  
     0.717
SED84589.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
     0.691
SEE11147.1
Transcriptional regulatory protein, C terminal.
  
     0.681
SEC48841.1
Hypothetical protein.
  
     0.659
SED23519.1
Asparagine synthase.
  
     0.580
SEC74506.1
Putative amidase domain-containing protein.
  
     0.577
SED05193.1
PAS domain S-box-containing protein.
  
     0.565
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.