STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC49419.1Uncharacterized conserved protein, DUF849 family. (236 aa)    
Predicted Functional Partners:
SEC49461.1
RNA ligase, DRB0094 family.
       0.799
SEC49375.1
Hypothetical protein.
       0.783
SEC49331.1
Penicillin amidase.
       0.710
SEC68650.1
3-aminobutyryl-CoA ammonia-lyase.
 
  
  0.621
SEB30916.1
Kynurenine formamidase.
  
    0.608
SEC96881.1
Acyl-CoA hydrolase.
    
  0.546
SEE02629.1
3-oxoacid CoA-transferase subunit B.
    
  0.546
SEE28516.1
3-oxoacid CoA-transferase subunit B.
    
  0.546
SED81147.1
Acyl transferase domain-containing protein.
  
 
  0.537
SED95151.1
Protein of unknown function.
    
 0.519
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.