STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC57225.1Stress response protein SCP2. (393 aa)    
Predicted Functional Partners:
SEC74802.1
Uncharacterized protein involved in tellurium resistance.
    0.830
SEC57069.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.800
SEC57109.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.800
SEC57144.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.800
SEC74727.1
Citrate lyase beta subunit.
 
     0.797
SEC74694.1
PELOTA RNA binding domain-containing protein.
 
     0.794
SEC74657.1
Hypothetical protein.
 
     0.792
SED84280.1
Tellurite resistance protein TerB.
 
  
 0.787
SED75299.1
Tellurium resistance protein TerD.
  
     0.774
SEC56977.1
Uronate dehydrogenase.
       0.677
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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