Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEC66703.1Lipoprotein-anchoring transpeptidase ErfK/SrfK. (419 aa)    
Predicted Functional Partners:
SED29482.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
     
 0.871
SEC82681.1
Penicillin-binding protein 2.
     
 0.853
SEC66747.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
       0.734
SEC66822.1
Cytochrome c oxidase subunit 2.
       0.734
SED27325.1
Membrane carboxypeptidase (penicillin-binding protein).
     
 0.714
SED27756.1
Colicin V production protein.
  
     0.662
SED66406.1
Cobalamin-independent synthase, Catalytic domain; Manually curated.
  
     0.606
SED25863.1
Protein of unknown function.
  
     0.572
SEC71789.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
 
  
 0.567
SEC98747.1
LysM domain-containing protein.
  
  
  0.567
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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