STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC69557.1DNA-binding transcriptional regulator, LacI/PurR family; Manually curated. (344 aa)    
Predicted Functional Partners:
SED79075.1
Amino acid adenylation domain-containing protein.
    
   0.919
SED79094.1
Amino acid adenylation domain-containing protein.
    
   0.919
SEC61955.1
Glutamate synthase (NADH) large subunit.
    
 
 0.889
SEC69519.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  
 0.858
SEC69595.1
PAP2 superfamily protein.
       0.793
SEC69480.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
    
 0.769
SEC69447.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
    
  0.727
SEE00138.1
Non-ribosomal peptide synthetase component F.
    
   0.724
SEE00248.1
Amino acid adenylation domain-containing protein.
    
   0.724
SEE02418.1
Amino acid adenylation domain-containing protein.
    
   0.724
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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