Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
SEC87946.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
SEC87903.1
UbiD family decarboxylase; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives.
 
  
  0.992
SEC87870.1
4-hydroxy-3-polyprenylbenzoate decarboxylase; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase.
 
  
  0.974
ubiX
4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
  
  0.894
SED29219.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
     
  0.859
SED34805.1
3-octaprenyl-4hydroxybenzoate decarboxylase; Belongs to the UbiD family.
 
  
  0.779
SEE30638.1
Hypothetical protein.
     
  0.711
SEE01416.1
Protein of unknown function.
  
     0.528
SEB90927.1
Hypothetical protein.
     
  0.514
SEB78109.1
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
     
  0.510
SEB89594.1
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.510
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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