STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC93891.1CO or xanthine dehydrogenase, FAD-binding subunit. (306 aa)    
Predicted Functional Partners:
SEC93857.1
Aerobic-type carbon monoxide dehydrogenase, small subunit, CoxS/CutS family.
 
  
  0.983
SEC93826.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 
  
  0.975
SED86384.1
Xanthine dehydrogenase D subunit.
 
  
  0.896
SED86351.1
Carbon-monoxide dehydrogenase small subunit.
 
  
  0.888
SEE12206.1
Carbon-monoxide dehydrogenase large subunit.
 
  
  0.872
SEE15987.1
Carbon-monoxide dehydrogenase small subunit.
 
  
  0.866
SEE12146.1
Carbon-monoxide dehydrogenase small subunit.
 
  
  0.863
SEE15961.1
Carbon-monoxide dehydrogenase large subunit.
 
  
  0.852
SEB96106.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
  
  0.850
SEE01822.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
  
  0.847
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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