Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC95828.1Protein of unknown function. (397 aa)    
Predicted Functional Partners:
SEC95901.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.975
SEC95794.1
Protein of unknown function.
 
     0.971
SEC95762.1
Hypothetical protein.
 
     0.970
SEC95856.1
MoxR-like ATPase.
 
     0.919
SEC95958.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.784
SEC95993.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.777
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
       0.771
SEC95662.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
     0.726
SEC95694.1
Two-component system, OmpR family, response regulator MtrA.
       0.685
SEC55727.1
Protoporphyrin IX magnesium-chelatase.
  
 
 0.660
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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